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By Dr. Priyom Bose, Ph.D. Reviewed by Danielle Ellis, B.Sc.

What happens after HIV infection?
Evolution of HIV diagnostic assays
Conclusions
References
Further reading

Acquired immunodeficiency syndrome (AIDS) is caused by the human immunodeficiency virus (HIV) that attacks the body’s immune system, making it vulnerable to all infections. One of the major concerns of the early AIDS epidemic that began in 1981 was the lack of proper diagnostic measures to identify infected individuals.1 Since the development of the first HIV diagnostic assay in 1985, scientists have continued to improve diagnostic accuracy, detection speed, and cost.

Image Credit: Hanna Karpiak/Shutterstock.com What happens after HIV infection?

The immune system produces antibodies after encountering harmful foreign substances or antigens. HIV infects the vital cells associated with immunity, such as macrophages, helper T cells, and dendritic cells, and disrupts their function. The three important HIV antigens are p24, gp 41, and gp 120.2

HIV is a slow-replicating retrovirus that is transmitted through sexual intercourse, sharing an infected needle, or by blood transfer.3 After HIV infection, the viral load cannot be measured immediately due to low plasma load. Typically, the viral RNA can be measured within 10 to 12 days after infection.4

Antibodies to p24 and gp 41 are the first serological markers used to detect HIV infection. IgG antibodies appear approximately three weeks after infection. In the majority of HIV-infected individuals, HIV antibodies appear to circulate within 1 to 2 months of the infection. However, in a few cases, it may take up to six months to appear at a detectable level.5 Evolution of HIV diagnostic assays

Over the years, scientists have developed many immunoassays and nucleic acid amplification tests (NAATs) to accurately and high-throughput HIV diagnosis. These tests are broadly divided into two categories, namely, screening and confirmatory tests. Typically, HIV tests are performed on blood, oral fluids, or urine samples.6

HIV screening is performed by various immunoassays that focus on detecting IgG antibodies against HIV-1 antigens in the serum. Techniques such as Western blot, line immunoassay (LIA), and recombinant immunoblot are used as confirmatory tests.7 Some of the important HIV diagnostic assays are discussed below: Serological testing for HIV

In the mid-1980s, simple serological tests for HIV antibodies were developed based on culture-derived viral antigen preparation.7 These tests enabled HIV diagnosis and assessed blood and blood product supplies. Since the early assays, various serological assays have been developed that aided simple/rapid testing, high-throughput screening, confirmatory tests, incidence determination, and epidemiological surveillance. Since its first development, five generations of enzyme immunoassays (EIAs) have emerged based on varied antigen preparations and detection chemistries.8

First-generation assays: The first-generation EIAs detect IgG antibodies from antigens derived from whole viral lysates of HIV-positive cultures. Since crude antigen lysate contains impurities, this method exhibited reduced specificity and high false positivity. In contrast, immunofluorescence assays or Western blotting (WB) have shown higher specificity and lower false positivity.

Second-generation assays: Second-generation assays involve the use of recombinant proteins or synthetic peptides derived from the immunodominant regions (IDR) of HIV-1 proteins and gp36 of HIV-2, which increases sensitivity and decreases false positivity.

Third-generation assays: Third-generation assays, including the Genetic Systems HIV-1/HIV-2 Plus O EIA, use a variety of antigens to detect HIV-1 and -2 antibodies in the serum. A major advantage of third-generation sandwich format assays is their ability to detect HIV-1 IgM antibodies early, enabling quicker HIV diagnosis.

Fourth-generation assays: The fourth-generation EIAs, including the Abbott Architect HIV Ag/Ab Combo assay, utilize fully automated chemiluminescent microparticle technology that can instantaneously identify antibodies to HIV-1 and HIV-2 and HIV-1 p24 antigen. This technique has further allowed early HIV diagnosis. Other advantages of fourth-generation high-throughput assays are their capacity to perform more than 150 tests per hour and their ability to test specimens immediately upon arrival and generate results within 30 minutes.  These assays are suitable for facilities, such as blood banks, that handle high volumes of blood samples.

Fifth-generation assays: Fifth-generation assays, such as the Bio-Rad BioPlex 2200 HIV Ag-Ab assay, use magnetic beads coated with p24 monoclonal antibodies and epitopes specific for HIV-1 and HIV-2. This type of assay has a major advantage in  that it can confirm HIV infection in a single test. Interested in Assay Kits? Explore Equipment Here

Despite the advancements in EIA assays, the challenges associated with the generation of false positive results persist. Therefore, EIA-reactive specimen is typically retested with supplemental tests, such as Western Blot. Rapid diagnostic tests Related StoriesSweden exceeds UNAIDS HIV goals but faces new challengesNutrition's pivotal role in combating tuberculosis: addressing N-AIDS for better outcomes

The first HIV rapid test was available in the early 1990s. It determined an individual's serostatus before surgery, maternal labor/delivery, and organ transplant. Rapid diagnostics is based on immunochromatographic technology that uses blood from finger pricks to assess HIV status. 9 This test can provide results in less than 30 minutes and can be used in point-of-care (POC) settings. Since this test presents both false positive and negative results, it is essential to confirm the findings with laboratory-based HIV assays.

The main advantage of this technique is that any non-laboratory staff can perform it in a primary health care center. Even though decentralization of HIV diagnostic services has increased HIV test service in remote areas, it has been challenged by the lack of national guidelines, waste disposal, inventory management, and quality assurance (QA) monitoring.10

HIV self-testing, based on rapid testing methods, has allowed individuals who would otherwise refrain from testing in fear of discrimination to perform the test privately and start proper intervention. The World Health Organization (WHO) has prequalified several HIV rapid tests for HIV self-testing, including the Insti HIV-1/HIV-2 antibody tests and the Oraquick rapid HIV-1/2 antibody test.10 Nucleic acid test (NAT)

The NAT identifies HIV nucleic acid, i.e., either RNA or proviral DNA, in the blood sample. This test is based on the principles of polymerase chain reaction (PCR), nucleic acid sequence-based amplification, or ligase chain reaction.11 This test has proved to be vital in situations when an antibody against HIV is absent in serum. NAT is also performed in newborns of HIV-infected mothers. Unlike other assays, this test can detect HIV even after recent or possible exposure to the virus. Furthermore, NAT can quantify viral load.

Revolutions in Infectious Disease Testing Conclusions

The advancements in HIV diagnostic assays have played a vital role in identifying, staging, and monitoring infected individuals, even when they are under antiretroviral therapy. These assays have played an important role in surveillance and identification of transmission hot spots. Extraordinary progress in HIV testing methodologies has not only reduced false positives but decreased assessment time as well. References Sharp PM, Hahn BH. Origins of HIV and the AIDS pandemic. Cold Spring Harb Perspect Med. 2011;1(1):a006841. doi: 10.1101/cshperspect.a006841. Foster JE., et al. Viruses as Pathogens: Animal Viruses, With Emphasis on Human Viruses. Viruses. 2018; 157-187. doi.org/10.1016/B978-0-12-811257-1.00007-3 Dasgupta A, Wahed. Human immunodeficiency virus (HIV) and hepatitis testing. Clinical Chemistry, Immunology and Laboratory Quality Control (Second Edition). 2021; 513-533. doi.org/10.1016/B978-0-12-815960-6.00015-7 Konrad BP, et al. On the duration of the period between exposure to HIV and detectable infection. Epidemics. 2017; 20, 73-83. doi.org/10.1016/j.epidem.2017.03.002 Davis LE. Acute viral meningitis and encephalitis. Infections of the Nervous System, 1987; 156-176. doi.org/10.1016/B978-0-407-02293-5.50014-3 Pant PN. Oral fluid-based rapid HIV testing: issues, challenges and research directions. Expert Review of Molecular Diagnostics. 2007; 7 (4), 325-328, DOI: 10.1586/14737159.7.4.325 Abdullah DM, et al. The contemporary immunoassays for HIV diagnosis: a concise overview. Asian Biomed (Res Rev News). 2023;17(1):3-12. doi: 10.2478/abm-2023-0038. Alexander TS. Human Immunodeficiency Virus Diagnostic Testing: 30 Years of Evolution. Clin Vaccine Immunol. 2016;23(4):249-53. doi: 10.1128/CVI.00053-16. Aidoo S, et al. Suitability of a rapid immunochromatographic test for detection of antibodies to human immunodeficiency virus in Ghana, West Africa. J Clin Microbiol. 2001;39(7):2572-5. doi: 10.1128/JCM.39.7.2572-2575.2001. Parekh BS, et al. Diagnosis of Human Immunodeficiency Virus Infection. Clin Microbiol Rev. 2018;32(1):e00064-18. doi: 10.1128/CMR.00064-18. Garrett, P. E. Quality control for nucleic acid tests: Common ground and special issues. Journal of Clinical Virology. 2001; 20(1-2), 15-21. doi.org/10.1016/S1386-6532(00)00150-5

Further ReadingAll HIV ContentThe Economic Impacts of AIDSRecent Advancements in Treating HIV

Last Updated: Nov 29, 2024

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Braves’ Acuña homers on 1st pitch after year away

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Braves' Acuña homers on 1st pitch after year away

ATLANTA — Ronald Acuña Jr. crushed his first pitch 467 feet for a home run in his dramatic return to the Atlanta Braves on Friday night, almost one year after he tore his left ACL.

Acuña, in his customary leadoff position in the lineup, turned on a fastball from San Diego Padres right-hander Nick Pivetta and sent the ball into the seats in left-center. Acuña hesitated briefly on his jog around the bases for a shuffle step.

The homer by Acuña had an exit velocity of 115.5 mph. It was the hardest hit ball by a Braves player this season.

Acuña added a single in his next at-bat and also enjoyed a defensive highlight, throwing out Elias Díaz at second base in the eighth following Díaz’s single.

But San Diego’s Manny Machado hit a tiebreaking homer off Raisel Iglesias in the ninth inning to overcome Acuña’s homer and beat the Braves 2-1 to end a six-game losing streak.

Acuña said after the game “I had a feeling” about hitting a homer in his return.

When asked if he meant he had a feeling about a first-pitch homer, Acuña said: “Exactly how it happened. … To me that’s just the culmination of all the work I put in.”

Infielder Orlando Arcia, a 2023 All-Star, was designated for assignment to clear a roster spot for Acuña, who started in right field.

Acuña said through interpreter Franco Garcia that he was “super excited, super happy” to make his return and added “I couldn’t sleep that much” after receiving the news of his return Thursday.

Braves manager Brian Snitker announced after Thursday night’s 8-7 loss at Washington that Acuña would make his season debut Friday night.

Snitker said Friday it felt good to make out his first lineup of 2025 that included Acuña.

“He’s one of those players that you better not go get a beer or whatever because you might miss something really cool, you know?” Snitker said. “I mean, he’s that type of force, I think, in the game. I think he’s going to energize everybody. Going to energize the fans. Going to energize his teammates.”

Acuña, the 2023 NL MVP, hurt his left knee May 26, 2024, and had surgery on June 6. The 27-year-old played six games in the minors on a rehab assignment, going 6-for-15 with two home runs.

Acuña played in only 49 games last season, batting .250 with four homers, 15 RBIs, 16 stolen bases and a .716 OPS.

This is Acuña’s second comeback from a major knee injury. He tore his right ACL on July 10, 2021, and returned the following April. When asked Friday what is different about this rehabilitation process, he said, “Patience. The patience, for sure. … I just think I’m in a much better place.”

Atlanta is 24-26 after an 0-7 start.

“It’s huge,” third baseman Austin Riley said. “The talent is there. The energy he brings, having Ronald up there at the top of the lineup. … He can change a game at any point.”

Acuña was a unanimous NL MVP in 2023 when he hit .336 with 41 home runs, 106 RBIs and a league-leading 1.012 OPS. Acuña also stole 73 bases that year to become the only player with 40 homers and 70 steals in one season.

Arcia, 30, was a 2023 NL All-Star when he hit .264 with 17 homers and 65 RBIs. Arcia lost his starting job due to an inability to compensate at the plate while suffering a defensive decline. He hit only .194 in 31 at-bats this season.

Snitker said he hopes Arcia will accept a minor league assignment if he does not land another job in the majors.

“I think we all know that it’s a business,” Acuña said of Arcia getting cut. “I’m happy to be back but I’m sorry that’s the move.”

Nick Allen has taken over as the starting shortstop. Snitker said Luke Williams is the backup shortstop and Eli White, a part-time starter in the outfield, will see more time in the infield.

The Associated Press contributed to this report.

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Skenes on trade chatter: ‘Anybody can play GM’

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Skenes on trade chatter: 'Anybody can play GM'

PITTSBURGH — Paul Skenes didn’t hear Pittsburgh Pirates general manager Ben Cherington say that trading the reigning National League Rookie of the Year to give the last-place club an influx of much-needed position player talent is “not at all part of the conversation.”

When someone relayed Cherington’s comments to him, the 22-year-old ace laughed.

“It doesn’t affect anything,” Skenes told The Associated Press late Friday night after the Pirates rallied for a 6-5, 10-inning win over Milwaukee. “Anybody can play GM.”

If Skenes, who celebrated his first anniversary in the majors two weeks ago, has learned anything during his rise to stardom over the past three years, it’s that noise is not the same as news.

“There’s no substance to just all that talk that you hear on social media and news outlets and stuff like that,” Skenes said.

It’s one of the many reasons he makes it a point to try and block out all the noise.

There could be a time when Skenes moves on, either by Pittsburgh’s choice or his own. That time, at least to Skenes, is not coming soon.

Pittsburgh is last in the major leagues in runs with 157, and has no high-profile position player prospect ready to walk into the home clubhouse at PNC Park as a big leaguer anytime soon.

“Ben’s job is to create a winning team and a winning organization,” Skenes said. “So, what it looks like to him [is up to him].”

Skenes added if the Pirates make a highly unusual move by trading one of the sport’s brightest young stars, even though he remains under team control for the rest of the decade and isn’t eligible for arbitration until 2027, he wouldn’t take it personally.

“I don’t expect it to happen,” Skenes stressed. “[But Cherington] is going to look out for what’s best for the Pirates. If he feels [trading me] is the right way to go, then he feels that’s the right way to go. But you know, I have to pitch well, that’s the bottom line.”

Skenes has been every bit the generational talent Pittsburgh hoped it was getting when it selected him with the top pick in the 2023 draft.

The 6-foot-6 right-hander was a sensation from the moment he made his big league debut last May and even as the team around him has scuffled — the Pirates tied a major league record by going 26 straight games without scoring more than four runs, a streak that ended in a loss to the Brewers on Thursday — he has not.

Five days after throwing the first complete game of his career in a 1-0 loss to Philadelphia, Skenes kept the Brewers in check over six innings, giving up one run on four hits with two walks and eight strikeouts.

When he induced Sal Frelick into a grounder to second to finish the sixth, many in the crowd of 24,646 rose to their feet to salute him as he sauntered back to the dugout. He exited with a 2-1 lead, then watched from afar as the struggling bullpen let it slip away. The Pirates, in an all-too-rare occurrence, fought back, rallying to tie it in the ninth on Oneil Cruz‘s second home run, then winning it in the 10th when Adam Frazier raced home on a wild pitch.

Afterward, music blared and Skenes — who hasn’t won in a month despite a 2.32 ERA across his five May starts — flashed a smile that was a mixture of happiness and relief.

“It’s nice to see us pull it out, which is something that we haven’t done as much to this point in the year,” he said. “Hopefully, it’s a good sign.”

The challenge of trying to help make the Pirates truly matter is something Skenes has eagerly accepted. He’s as invested in the city as he is in the team.

Asked if the outside speculation that the club should move on from him so quickly is disrespectful to the effort he has given the Pirates, the former Air Force cadet shrugged.

“I don’t feel anything good or bad toward it,” he said.

It hasn’t been the start to 2025 that anybody associated with the Pirates has wanted. Skenes believes there has been a “little bit more fight” since Don Kelly took over as manager. He believes that he’s gaining more mastery over his ever-expanding arsenal. He believes he’s developing chemistry with catcher Henry Davis.

Skenes was asked about what it has been like to work with Davis, the top overall pick in the 2021 draft.

“Just really got to keep doing what we’re doing,” Skenes said, “continue learning and let everything take care of itself, I guess.”

The Associated Press contributed to this report.

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Companies turn to AI to navigate Trump tariff turbulence

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Companies turn to AI to navigate Trump tariff turbulence

Artificial intelligence robot looking at futuristic digital data display.

Yuichiro Chino | Moment | Getty Images

Businesses are turning to artificial intelligence tools to help them navigate real-world turbulence in global trade.

Several tech firms told CNBC say they’re deploying the nascent technology to visualize businesses’ global supply chains — from the materials that are used to form products, to where those goods are being shipped from — and understand how they’re affected by U.S. President Donald Trump’s reciprocal tariffs.

Last week, Salesforce said it had developed a new import specialist AI agent that can “instantly process changes for all 20,000 product categories in the U.S. customs system and then take action on them” as needed, to help navigate changes to tariff systems.

Engineers at the U.S. software giant used the Harmonized Tariff Schedule, a 4,400-page document of tariffs on goods imported to the U.S., to inform answers generated by the agent.

“The sheer pace and complexity of global tariff changes make it nearly impossible for most businesses to keep up manually,” Eric Loeb, executive vice president of government affairs at Salesforce, told CNBC. “In the past, companies might have relied on small teams of in-house experts to keep pace.”

Firms say that AI systems are enabling them to take decisions on adjustments to their global supply chains much faster.

Andrew Bell, chief product officer of supply chain management software firm Kinaxis, said that manufacturers and distributors looking to inform their response to tariffs are using his firm’s machine learning technology to assess their products and the materials that go into them, as well as external signals like news articles and macroeconomic data.

“With that information, we can start doing some of those simulations of, here is a particular part that is in your build material that has a significant tariff. If you switched to using this other part instead, what would the impact be overall?” Bell told CNBC.

‘AI’s moment to shine’

Trump’s tariffs list — which covers dozens of countries — has forced companies to rethink their supply chains and pricing, with the likes of Walmart and Nike already raising prices on some products. The U.S. imported about $3.3 trillion of goods in 2024, according to census data.

Uncertainty from the U.S. tariff measures “actually probably presents AI’s moment to shine,” Zack Kass, a futurist and former head of OpenAI’s go-to-market strategy, told CNBC’s Silvia Amaro at the Ambrosetti Forum in Italy last month.

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“If you wonder how hard things could get without AI vis-a-vis automation, and what would happen in a world where you can’t just employ a bunch of people overnight, AI presents this alternative proposal,” he added.

Nagendra Bandaru, managing partner and global head of technology services at Indian IT giant Wipro, said clients are using the company’s agentic AI solutions “to pivot supplier strategies, adjust trade lanes, and manage duty exposure dynamically as policy landscapes evolve.”

Wipro says it uses a range of AI systems — both proprietary and supplied by third parties — from large language models to traditional machine learning and computer vision techniques to inspect physical assets in cross-border transit.

‘Not a silver bullet’

While it preferred to keep company names confidential, Wipro said that firms using its AI products to navigate Trump’s tariffs range from a Fortune 500 electronics manufacturer with factories in Asia to an automotive parts supplier exporting to Europe and North America.

“AI is a powerful enabler — but not a silver bullet,” Bandaru told CNBC. “It doesn’t replace trade policy strategy, it enhances it by transforming global trade from a reactive challenge into a proactive, data-driven advantage.”

AI was already a key investment priority for global firms prior to Trump’s sweeping tariff announcements on April. Nearly three-quarters of business leaders ranked AI and generative AI in their top three technologies for investment in 2025, according to a report by Capgemini published in January.

“There are a number of ways AI can assist companies dealing with the tariffs and resulting uncertainty.  But any AI solution’s success will be predicated on the quality of the data it has access to,” Ajay Agarwal, partner at Bain Capital Ventures, told CNBC.

The venture capitalist said that one of his portfolio companies, FourKites, uses supply chain network data with AI to help firms understand the logistics impacts of adjusting suppliers due to tariffs.

“They are working with a number of Fortune 500 companies to leverage their agents for freight and ocean to provide this level of visibility and intelligence,” Agarwal said.

“Switching suppliers may reduce tariffs costs, but might increase lead times and transportation costs,” he added. “In addition, the volatility of the tariffs [has] severely impacted the rates and capacity available in both the ocean and the domestic freight networks.”

WATCH: Former OpenAI exec says tariffs ‘present AI’s moment to shine’

Former OpenAI exec says tariffs 'present AI's moment to shine'

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